ImageJ macros and scripts written at the imaging facility MRI
-
Updated
Sep 25, 2025 - Jupyter Notebook
ImageJ macros and scripts written at the imaging facility MRI
Helper scripts and macros using BoneJ
Streamline fluorescent microscopy workflows with these scripts. This collection provides automated cell segmentation & tracking using TrackMate, featuring two-step segmentation, flexible temporal/spatial tracking, and efficient analysis of large datasets. Ideal for researchers automating imaging analysis.
ImageJ macro scripts for analyzing fluorescent microscopy images: segmenting cells, divide into quadrants, and quantify innervation
Add a description, image, and links to the imagej-macro-scripts topic page so that developers can more easily learn about it.
To associate your repository with the imagej-macro-scripts topic, visit your repo's landing page and select "manage topics."