Merge pull request #92 from ericpre/remove_mib_workflow

Remove importing mib tutorial since it is now taken care of in rosettasciio

Author: CSSFrancis

.gitignore

@@ -1,3 +1,4 @@
 *.bak #for spell checking
 
 .ipynb_checkpoints/
+.virtual_documents/

00 Importing large mib datasets.ipynb

@@ -5,21 +5,11 @@
 #   $ ./run_nbval.sh
 
 # List notebooks that nbval should run
-declare -a NOTEBOOKS=(\
-  "00 Importing large mib datasets.ipynb"\
-  "01 GaAs Nanowire - Data Inspection - Preprocessing - Unsupervised Machine Learning.ipynb"\
-  "02 GaAs Nanowire - Phase Mapping - Orientation Mapping.ipynb"\
-  "03 Reference Standards - Dimension Calibrations - Rotation Calibrations.ipynb"\
-  "04 Simulate Data - Phase Mapping - Orientation Mapping.ipynb"\
-  "05 Simulate Data - Strain Mapping.ipynb"\
-  "06 Nanocrystal segmentation in SPED data - Demonstration on partly overlapping MgO cubes.ipynb"\
-  "07 Azimuthal Integration Using pyFAI Detector.ipynb"\
-  "08 Pair Distribution Function Analysis.ipynb"\
-  "09 Angular Correlations of Amorphous Materials.ipynb"\
-  "10 STEM DPC Analysis of Magnetic Sample.ipynb"\
-  "11 Accelerated orientation mapping with template matching.ipynb"\
-  "12 MolecularGlassOrientationMapping.ipynb"\
-)
+NOTEBOOKS=(*.ipynb)
+echo "List of Notebooks:"
+for nb in "${NOTEBOOKS[@]}"; do
+  echo $nb
+done
 
 # clean notebooks to remove outputs
 nb-clean clean "${NOTEBOOKS[@]}"