Search results

clarification of coverage in Sniffles2 VCF

Status: Open.

#598 In fritzsedlazeck/Sniffles;

· svedwards opened on Nov 16, 2025

Pooled samples and mosaic option

Status: Open.

#590 In fritzsedlazeck/Sniffles;

· SheepwormJM opened on Oct 7, 2025

Support for MATEID when reporting breakends with known mates?

enhancement

Status: Open.

#589 In fritzsedlazeck/Sniffles;

· roland-ewald opened on Sep 29, 2025

·  

2.8

Parameter suggestions for Sniffles to detect transposable elements from ONT data

Status: Open.

#578 In fritzsedlazeck/Sniffles;

· amarkez opened on Aug 13, 2025

Call large indel with small genomes

Status: Open.

#577 In fritzsedlazeck/Sniffles;

· ChenddatHKU opened on Aug 7, 2025

Wrong insertion can be inferred from split alignments

Status: Open.

#561 In fritzsedlazeck/Sniffles;

· HillJamie opened on May 14, 2025

Issues with Sniffles2 for α-Globin SV Detection

Status: Open.

#547 In fritzsedlazeck/Sniffles;

· virginied33 opened on Mar 11, 2025

Expectations regarding discrepancies in individual vs population called VCFs

Status: Open.

#546 In fritzsedlazeck/Sniffles;

· stallmanGEL opened on Mar 4, 2025

bug: BND evidence from supplementary alignements discarded (sometimes)

Status: Open.

#513 In fritzsedlazeck/Sniffles;

· yfarjoun opened on Oct 23, 2024

Are calls made from supplementary alignments?

bug

Status: Open.

#502 In fritzsedlazeck/Sniffles;

· jo-mc opened on Aug 3, 2024

·  

2.7

Difference between SUPPORT, DV and RNAMES

Status: Open.

#496 In fritzsedlazeck/Sniffles;

· kamilafras opened on Jul 17, 2024

Phailed SV phasing

Status: Open.

#488 In fritzsedlazeck/Sniffles;

· agatafant opened on Jun 21, 2024