Search results

getting more than two haplotypes with --n-hap

Status: Open.

#897 In chhylp123/hifiasm;

· dcopetti opened on Dec 9, 2025

HiFiAsm gives exit code zero on error?

Status: Open.

#896 In chhylp123/hifiasm;

· bbimber opened on Dec 2, 2025

ONT assembly high internal stop codons rate in BUSCO

Status: Open.

#895 In chhylp123/hifiasm;

· yuchangyue1209 opened on Nov 24, 2025

support for pore-C or CiFi data?

Status: Open.

#894 In chhylp123/hifiasm;

· dabitz opened on Nov 23, 2025

ONT and Pooled Samples

Status: Open.

#893 In chhylp123/hifiasm;

· NinaMercedes opened on Nov 20, 2025

Excessively high Missing on BUSCO

Status: Open.

#892 In chhylp123/hifiasm;

· chughes-g opened on Nov 17, 2025

Error: # covered HiFi reads:0, # chained HiFi reads:0 when running trio assembly

Status: Open.

#891 In chhylp123/hifiasm;

· YU-ZhiHao opened on Oct 19, 2025

How does hifiasm assign hap1 and hap2 during the assembling process given HIFI reads and HiC reads?

Status: Open.

#890 In chhylp123/hifiasm;

· Abieskawa opened on Oct 17, 2025

differing length and number of contigs with and without hg-size flag

Status: Open.

#889 In chhylp123/hifiasm;

· zanderson82 opened on Oct 13, 2025

How to reduce duplicate BUSCOs in a HiFi + Hi-C assembly of a 2.5 Gb genome (6.9% heterozygosity, 90% repeats)

Status: Open.

#888 In chhylp123/hifiasm;

· Tang-pro opened on Oct 13, 2025

Floating point exception (core dumped) when running trio assembly

Status: Open.

#887 In chhylp123/hifiasm;

· YU-ZhiHao opened on Oct 9, 2025

Hifiasm is getting killed or unable to find overlaps

Status: Open.

#886 In chhylp123/hifiasm;

· Pranav-Datar opened on Oct 6, 2025