From 271f8f25aed396a616a2056119f9b7f2c332f8f3 Mon Sep 17 00:00:00 2001
From: Ian Hunt-Isaak <ianhuntisaak@gmail.com>
Date: Tue, 8 Jul 2025 16:34:50 -0400
Subject: [PATCH 1/2] update index file

---
 workshops/scipy2025/index.ipynb | 18 +++++++++++++-----
 1 file changed, 13 insertions(+), 5 deletions(-)

diff --git a/workshops/scipy2025/index.ipynb b/workshops/scipy2025/index.ipynb
index 66a97b52..7a10f397 100644
--- a/workshops/scipy2025/index.ipynb
+++ b/workshops/scipy2025/index.ipynb
@@ -39,13 +39,15 @@
     "| Topic | Time | Notebook Links | \n",
     "| :- | - | - | \n",
     "| Introduction and Setup | 1:30 (10 min) | | \n",
-    "| The Xarray Data Model | 1:40 (50 min) | [Data structures](../../fundamentals/01_data_structures.md) | \n",
+    "| The Xarray Data Model | 1:40 (50 min) | [Data structures Part 1](../../intermediate/datastructures-intermediate.ipynb)|\n",
+    "|||[Data structures In Biology](../../intermediate/BiologyDataset.ipynb)| \n",
+    "|||[Data structures Part 2](../../fundamentals/01_data_structures.md)| \n",
     "| *10 minute Break*  \n",
-    "| Computational Patterns | 2:30 (50 min) |  [Computational Patterns](../../intermediate/computation/01-high-level-computation-patterns.ipynb) <br> [Hierarchical computation](../../intermediate/computation/hierarchical_computation.ipynb) |  \n",
+    "| Computational Patterns | 2:30 (50 min) |  [Computational Patterns](../../intermediate/01-high-level-computation-patterns.ipynb) <br>  |  \n",
     "| *10 minute Break*  | \n",
-    "| Zarr & the cloud | 4:30 (50 min)  | [Intro to Zarr](../../intermediate/intro-to-zarr.ipynb) <br> [CMIP6 on the cloud](../../intermediate/remote_data/cmip6-cloud.ipynb) <br> |\n",
+    "| Storage formats | 3:30 (50 min) | [Storage formats](../../fundamentals/01.1_io.ipynb)  |  \n",
     "| *10 minute Break*  | \n",
-    "| Other storage formats | 3:30 (50 min) | [IO basics](../../fundamentals/01.1_io.ipynb) <br> [Data models](../../intermediate/storage_formats.ipynb) <br> [Custom backends](../../advanced/backends/backends.md) <br> |  \n",
+    "| Zarr & the cloud | 4:30 (50 min)  | [Intro to Zarr](../../intermediate/intro-to-zarr.ipynb) |\n",
     "| | End 5:30 | |"
    ]
   },
@@ -61,6 +63,11 @@
   }
  ],
  "metadata": {
+  "kernelspec": {
+   "display_name": "Python 3 (ipykernel)",
+   "language": "python",
+   "name": "python3"
+  },
   "language_info": {
    "codemirror_mode": {
     "name": "ipython",
@@ -70,7 +77,8 @@
    "mimetype": "text/x-python",
    "name": "python",
    "nbconvert_exporter": "python",
-   "pygments_lexer": "ipython3"
+   "pygments_lexer": "ipython3",
+   "version": "3.12.9"
   }
  },
  "nbformat": 4,

From 4039592025cc00f85ea44fcf7cad3e7c78e7fa4d Mon Sep 17 00:00:00 2001
From: "pre-commit-ci[bot]"
 <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Date: Tue, 8 Jul 2025 20:35:27 +0000
Subject: [PATCH 2/2] [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci
---
 workshops/scipy2025/index.ipynb | 8 +-------
 1 file changed, 1 insertion(+), 7 deletions(-)

diff --git a/workshops/scipy2025/index.ipynb b/workshops/scipy2025/index.ipynb
index 7a10f397..909f0c23 100644
--- a/workshops/scipy2025/index.ipynb
+++ b/workshops/scipy2025/index.ipynb
@@ -63,11 +63,6 @@
   }
  ],
  "metadata": {
-  "kernelspec": {
-   "display_name": "Python 3 (ipykernel)",
-   "language": "python",
-   "name": "python3"
-  },
   "language_info": {
    "codemirror_mode": {
     "name": "ipython",
@@ -77,8 +72,7 @@
    "mimetype": "text/x-python",
    "name": "python",
    "nbconvert_exporter": "python",
-   "pygments_lexer": "ipython3",
-   "version": "3.12.9"
+   "pygments_lexer": "ipython3"
   }
  },
  "nbformat": 4,